STRALCP - Structure Alignment-based Clustering of Proteins (based on Identified Structurally Conserved Spans). Version: (08/16/2007) Questions or comments please send to Adam Zemla (adamz@llnl.gov) Parameters for the clustering program: Length of slots: 10 (empty: 0.20 boundaries: 0.20) Length of spans: 3 Cutoff for LGA_S score: 60.00 (refinement: 0.20) STRALCP data: SCOP_a_5.ok/TMP List of molecules: STRAL_a_5_L1 Name: d1aipc1 a.5.2.2 52 1 Name: d1aipd1 a.5.2.2 52 2 Name: d1aipg1 a.5.2.2 52 3 Name: d1aiph1 a.5.2.2 51 4 Name: d1aua_1 a.5.3.1 93 5 Name: d1bdxa1 a.5.1.1 48 6 Name: d1bdxb1 a.5.1.1 48 7 Name: d1bdxc1 a.5.1.1 48 8 Name: d1bdxd1 a.5.1.1 48 9 Name: d1bvsa1 a.5.1.1 49 10 Name: d1bvsb1 a.5.1.1 50 11 Name: d1bvsc1 a.5.1.1 49 12 Name: d1bvsd1 a.5.1.1 50 13 Name: d1bvse1 a.5.1.1 49 14 Name: d1bvsf1 a.5.1.1 50 15 Name: d1bvsg1 a.5.1.1 49 16 Name: d1bvsh1 a.5.1.1 50 17 Name: d1c7ya1 a.5.1.1 49 18 Name: d1cuk_1 a.5.1.1 48 19 Name: d1dv0a_ a.5.2.1 45 20 Name: d1efub3 a.5.2.2 54 21 Name: d1efud3 a.5.2.2 54 22 Name: d1eija_ a.5.6.1 72 23 Name: d1enwa_ a.5.4.1 114 24 Name: d1f4ia_ a.5.2.1 45 25 Name: d1go5a_ a.5.2.3 69 26 Name: d1hjp_1 a.5.1.1 46 27 Name: d1ifya_ a.5.2.1 49 28 Name: d1ixrb1 a.5.1.1 53 29 Name: d1ixsa_ a.5.1.1 50 30 Name: d1mn3a_ a.5.2.4 54 31 Name: d1nvma1 a.5.7.1 51 32 Name: d1nvmc1 a.5.7.1 49 33 Name: d1nvme1 a.5.7.1 49 34 Name: d1nvmg1 a.5.7.1 51 35 Name: d1o6ua1 a.5.3.1 75 36 Name: d1o6uc1 a.5.3.1 75 37 Name: d1o6ue1 a.5.3.1 75 38 Name: d1oaia_ a.5.2.3 59 39 Name: d1oipa1 a.5.3.1 66 40 Name: d1oiza1 a.5.3.1 82 41 Name: d1oizb1 a.5.3.1 80 42 Name: d1olma1 a.5.3.1 75 43 Name: d1olmc1 a.5.3.1 75 44 Name: d1olme1 a.5.3.1 75 45 Name: d1oqya1 a.5.2.1 41 46 Name: d1oqya2 a.5.2.1 44 47 Name: d1otra_ a.5.2.4 49 48 Name: d1p3qq_ a.5.2.4 45 49 Name: d1p3qr_ a.5.2.4 36 50 Name: d1p9qc1 a.5.8.1 72 51 Name: d1pgya_ a.5.2.1 47 52 Name: d1q02a_ a.5.2.1 52 53 Name: d1qzea1 a.5.2.1 41 54 Name: d1qzea2 a.5.2.1 44 55 Name: d1r5la1 a.5.3.1 66 56 Name: d1rqba1 a.5.7.2 168 57 Name: d1rqea1 a.5.7.2 168 58 Name: d1rqha1 a.5.7.2 168 59 Name: d1rr2a1 a.5.7.2 168 60 Name: d1s3ha1 a.5.7.2 168 61 Name: d1sr9a1 a.5.7.1 46 62 Name: d1sr9b1 a.5.7.1 44 63 Name: d1t3ta1 a.5.10.1 68 64 Name: d1t95a1 a.5.8.1 75 65 Name: d1ttea1 a.5.2.1 55 66 Name: d1u5ja1 a.5.7.2 168 67 Name: d1ufza_ a.5.9.1 83 68 Name: d1v92a_ a.5.2.3 46 69 Name: d1vdla_ a.5.2.1 80 70 Name: d1vega_ a.5.2.1 83 71 Name: d1veka_ a.5.2.1 84 72 Name: d1vg5a_ a.5.2.1 73 73 Name: d1wgla_ a.5.2.4 59 74 Name: d1wgna_ a.5.2.1 63 75 Name: d1whca_ a.5.2.1 64 76 Name: d1wiva_ a.5.2.1 73 77 Name: d1wjia_ a.5.2.1 63 78 Name: d1xb2b1 a.5.2.2 56 79 Total number of members: 79 .................................................. CLUSTER_NB: 1 Nb_of_members(1): 7 Reference_name: d1aipd1 Length: 52 Nb_of_matches: 32 Nb_of_spans: 3 Nb_of_slots: 5 Cluster Name Class .#########....############.###########............ Cluster:1 d1aipd1 a.5.2.2 .MELIKKLRE....GMMDVKRALEDA.WDEEKAVQLLR............ Cluster:1 d1aipc1 a.5.2.2 .MELIKKLRE....GMMDVKRALEDA.WDEEKAVQLLR............ Cluster:1 d1aipg1 a.5.2.2 .MELIKKLRE....GMMDVKRALEDA.WDEEKAVQLLR............ Cluster:1 d1dv0a_ a.5.2.1 .KEAIERLKA....PESLVIQAYFAC.KNENLAANFLL............ Cluster:1 d1f4ia_ a.5.2.1 .KEAIERLKA....EESLVIQAYFAC.KNENLAANFLL............ Cluster:1 d1oqya1 a.5.2.1 .ETMLTEIMS....ERERVVAALRAS.NNPHRAVEYLL............ Cluster:1 d1qzea1 a.5.2.1 .ETMLTEIMS....ERERVVAALRAS.NNPHRAVEYLL............ # STRALCP results (SPANS in common) for: d1aipd1 d1aipd1 3-11 4_D:12_D MELIKKLRE d1aipd1 16-27 17_D:28_D GMMDVKRALEDA d1aipd1 29-39 30_D:40_D WDEEKAVQLLR # STRALCP results (SPANS in common) for: d1aipc1 d1aipc1 3-11 4_C:12_C MELIKKLRE d1aipc1 16-27 17_C:28_C GMMDVKRALEDA d1aipc1 29-39 30_C:40_C WDEEKAVQLLR # STRALCP results (SPANS in common) for: d1aipg1 d1aipg1 3-11 4_G:12_G MELIKKLRE d1aipg1 16-27 17_G:28_G GMMDVKRALEDA d1aipg1 29-39 30_G:40_G WDEEKAVQLLR # STRALCP results (SPANS in common) for: d1dv0a_ d1dv0a_ 3-11 3_A:11_A KEAIERLKA d1dv0a_ 15-26 15_A:26_A PESLVIQAYFAC d1dv0a_ 28-38 28_A:38_A KNENLAANFLL # STRALCP results (SPANS in common) for: d1f4ia_ d1f4ia_ 3-11 3_A:11_A KEAIERLKA d1f4ia_ 15-26 15_A:26_A EESLVIQAYFAC d1f4ia_ 28-38 28_A:38_A KNENLAANFLL # STRALCP results (SPANS in common) for: d1oqya1 d1oqya1 5-13 164_A:172_A ETMLTEIMS d1oqya1 17-28 176_A:187_A ERERVVAALRAS d1oqya1 30-40 189_A:199_A NNPHRAVEYLL # STRALCP results (SPANS in common) for: d1qzea1 d1qzea1 5-13 164_A:172_A ETMLTEIMS d1qzea1 17-28 176_A:187_A ERERVVAALRAS d1qzea1 30-40 189_A:199_A NNPHRAVEYLL END_of_CLUSTER .......................................... CLUSTER_NB: 2 Nb_of_members(1): 17 Reference_name: d1ixsa_ Length: 50 Nb_of_matches: 34 Nb_of_spans: 2 Nb_of_slots: 6 Cluster Name Class ....#######################.........###########. Cluster:2 d1ixsa_ a.5.1.1 ....EEAVMALAALGFKEAQARAVVLD.........AQDLIKEALKR. Cluster:2 d1bdxa1 a.5.1.1 ....QEAVAALVALGYKPQEASRMVSK.........SETLIREALRA. Cluster:2 d1bdxb1 a.5.1.1 ....QEAVAALVALGYKPQEASRMVSK.........SETLIREALRA. Cluster:2 d1bdxc1 a.5.1.1 ....QEAVAALVALGYKPQEASRMVSK.........SETLIREALRA. Cluster:2 d1bdxd1 a.5.1.1 ....QEAVAALVALGYKPQEASRMVSK.........SETLIREALRA. Cluster:2 d1bvsa1 a.5.1.1 ....GSVVEALVGLGFAAKQAEEATDQ.........TSSALRAALSL. Cluster:2 d1bvsb1 a.5.1.1 ....GSVVEALVGLGFAAKQAEEATDQ.........TSSALRAALSL. Cluster:2 d1bvsc1 a.5.1.1 ....GSVVEALVGLGFAAKQAEEATDQ.........TSSALRAALSL. Cluster:2 d1bvsd1 a.5.1.1 ....GSVVEALVGLGFAAKQAEEATDQ.........TSSALRAALSL. Cluster:2 d1bvse1 a.5.1.1 ....GSVVEALVGLGFAAKQAEEATDQ.........TSSALRAALSL. Cluster:2 d1bvsf1 a.5.1.1 ....GSVVEALVGLGFAAKQAEEATDQ.........TSSALRAALSL. Cluster:2 d1bvsg1 a.5.1.1 ....GSVVEALVGLGFAAKQAEEATDQ.........TSSALRAALSL. Cluster:2 d1bvsh1 a.5.1.1 ....GSVVEALVGLGFAAKQAEEATDQ.........TSSALRAALSL. Cluster:2 d1c7ya1 a.5.1.1 ....QEAVAALVALGYKPQEASRMVSK.........SETLIREALRA. Cluster:2 d1cuk_1 a.5.1.1 ....QEAVARLVALGYKPQEASRMVSK.........SETLIREALRA. Cluster:2 d1hjp_1 a.5.1.1 ....QEAVAALVALGYKPQEASRMVSK.........SETLIREALRA. Cluster:2 d1ixrb1 a.5.1.1 ....EEAVMALAALGFKEAQARAVVLD.........AQDLIKEALKR. # STRALCP results (SPANS in common) for: d1ixsa_ d1ixsa_ 6-28 147_A:169_A EEAVMALAALGFKEAQARAVVLD d1ixsa_ 38-48 179_A:189_A AQDLIKEALKR # STRALCP results (SPANS in common) for: d1bdxa1 d1bdxa1 6-28 161_A:183_A QEAVAALVALGYKPQEASRMVSK d1bdxa1 36-46 191_A:201_A SETLIREALRA # STRALCP results (SPANS in common) for: d1bdxb1 d1bdxb1 6-28 161_B:183_B QEAVAALVALGYKPQEASRMVSK d1bdxb1 36-46 191_B:201_B SETLIREALRA # STRALCP results (SPANS in common) for: d1bdxc1 d1bdxc1 6-28 161_C:183_C QEAVAALVALGYKPQEASRMVSK d1bdxc1 36-46 191_C:201_C SETLIREALRA # STRALCP results (SPANS in common) for: d1bdxd1 d1bdxd1 6-28 161_D:183_D QEAVAALVALGYKPQEASRMVSK d1bdxd1 36-46 191_D:201_D SETLIREALRA # STRALCP results (SPANS in common) for: d1bvsa1 d1bvsa1 5-27 152_A:174_A GSVVEALVGLGFAAKQAEEATDQ d1bvsa1 34-44 188_A:198_A TSSALRAALSL # STRALCP results (SPANS in common) for: d1bvsb1 d1bvsb1 6-28 152_B:174_B GSVVEALVGLGFAAKQAEEATDQ d1bvsb1 35-45 188_B:198_B TSSALRAALSL # STRALCP results (SPANS in common) for: d1bvsc1 d1bvsc1 5-27 152_C:174_C GSVVEALVGLGFAAKQAEEATDQ d1bvsc1 34-44 188_C:198_C TSSALRAALSL # STRALCP results (SPANS in common) for: d1bvsd1 d1bvsd1 6-28 152_D:174_D GSVVEALVGLGFAAKQAEEATDQ d1bvsd1 35-45 188_D:198_D TSSALRAALSL # STRALCP results (SPANS in common) for: d1bvse1 d1bvse1 5-27 152_E:174_E GSVVEALVGLGFAAKQAEEATDQ d1bvse1 34-44 188_E:198_E TSSALRAALSL # STRALCP results (SPANS in common) for: d1bvsf1 d1bvsf1 6-28 152_F:174_F GSVVEALVGLGFAAKQAEEATDQ d1bvsf1 35-45 188_F:198_F TSSALRAALSL # STRALCP results (SPANS in common) for: d1bvsg1 d1bvsg1 5-27 152_G:174_G GSVVEALVGLGFAAKQAEEATDQ d1bvsg1 34-44 188_G:198_G TSSALRAALSL # STRALCP results (SPANS in common) for: d1bvsh1 d1bvsh1 6-28 152_H:174_H GSVVEALVGLGFAAKQAEEATDQ d1bvsh1 35-45 188_H:198_H TSSALRAALSL # STRALCP results (SPANS in common) for: d1c7ya1 d1c7ya1 7-29 161_A:183_A QEAVAALVALGYKPQEASRMVSK d1c7ya1 37-47 191_A:201_A SETLIREALRA # STRALCP results (SPANS in common) for: d1cuk_1 d1cuk_1 6-28 161:183 QEAVARLVALGYKPQEASRMVSK d1cuk_1 36-46 191:201 SETLIREALRA # STRALCP results (SPANS in common) for: d1hjp_1 d1hjp_1 4-26 161:183 QEAVAALVALGYKPQEASRMVSK d1hjp_1 34-44 191:201 SETLIREALRA # STRALCP results (SPANS in common) for: d1ixrb1 d1ixrb1 9-31 147_B:169_B EEAVMALAALGFKEAQARAVVLD d1ixrb1 41-51 179_B:189_B AQDLIKEALKR END_of_CLUSTER ......................................... CLUSTER_NB: 3 Nb_of_members(1): 2 Reference_name: d1qzea2 Length: 44 Nb_of_matches: 42 Nb_of_spans: 1 Nb_of_slots: 5 Cluster Name Class ########################################## Cluster:3 d1qzea2 a.5.2.1 PQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQN Cluster:3 d1oqya2 a.5.2.1 PQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQN # STRALCP results (SPANS in common) for: d1qzea2 d1qzea2 2-43 318_A:359_A PQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQN # STRALCP results (SPANS in common) for: d1oqya2 d1oqya2 2-43 318_A:359_A PQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQN END_of_CLUSTER ....................................... CLUSTER_NB: 4 Nb_of_members(1): 2 Reference_name: d1r5la1 Length: 66 Nb_of_matches: 63 Nb_of_spans: 2 Nb_of_slots: 7 Cluster Name Class #################.############################################## Cluster:4 d1r5la1 a.5.3.1 PGLAALRRRAREAGVPL.PLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHP Cluster:4 d1oipa1 a.5.3.1 PGLAALRRRAREAGVPL.PLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHP # STRALCP results (SPANS in common) for: d1r5la1 d1r5la1 2-18 26_A:42_A PGLAALRRRAREAGVPL d1r5la1 20-65 44_A:89_A PLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHP # STRALCP results (SPANS in common) for: d1oipa1 d1oipa1 2-18 26_A:42_A PGLAALRRRAREAGVPL d1oipa1 20-65 44_A:89_A PLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHP END_of_CLUSTER ................................... CLUSTER_NB: 5 Nb_of_members(1): 4 Reference_name: d1oaia_ Length: 59 Nb_of_matches: 28 Nb_of_spans: 3 Nb_of_slots: 5 Cluster Name Class ......########......###########....#########............. Cluster:5 d1oaia_ a.5.2.3 ......QEMLQAFS......LEWSQKCLQDN....TRSAQAFTH............. Cluster:5 d1otra_ a.5.2.4 ......ESKLSILM......KSKLQVHLLEN....DLTIGLLLK............. Cluster:5 d1pgya_ a.5.2.1 ......DMEIARLM......IEEATEFYEND....ERYLEILKS............. Cluster:5 d1v92a_ a.5.2.3 ......QDALREFV......EDRARFFLESA....QIALASFYE............. # STRALCP results (SPANS in common) for: d1oaia_ d1oaia_ 8-15 568_A:575_A QEMLQAFS d1oaia_ 22-32 582_A:592_A LEWSQKCLQDN d1oaia_ 37-45 597_A:605_A TRSAQAFTH # STRALCP results (SPANS in common) for: d1otra_ d1otra_ 5-12 10_A:17_A ESKLSILM d1otra_ 20-30 25_A:35_A KSKLQVHLLEN d1otra_ 35-43 40_A:48_A DLTIGLLLK # STRALCP results (SPANS in common) for: d1pgya_ d1pgya_ 8-15 8_A:15_A DMEIARLM d1pgya_ 21-31 21_A:31_A IEEATEFYEND d1pgya_ 35-43 35_A:43_A ERYLEILKS # STRALCP results (SPANS in common) for: d1v92a_ d1v92a_ 6-13 6_A:13_A QDALREFV d1v92a_ 20-30 20_A:30_A EDRARFFLESA d1v92a_ 35-43 35_A:43_A QIALASFYE END_of_CLUSTER ................................ CLUSTER_NB: 6 Nb_of_members(1): 8 Reference_name: d1o6ua1 Length: 75 Nb_of_matches: 45 Nb_of_spans: 3 Nb_of_slots: 8 Cluster Name Class ........##############.............###########################....####... Cluster:6 d1o6ua1 a.5.3.1 ........PRQKEALAKFRENV.............FLLRWLRARSFDLQKSEAXLRKHVEFR....IDNI... Cluster:6 d1aua_1 a.5.3.1 ........SAQEKALAELRKLL.............TLLRFLRARKFDVQLAKEMFENCEKWR....TDTI... Cluster:6 d1o6uc1 a.5.3.1 ........PRQKEALAKFRENV.............FLLRWLRARSFDLQKSEAXLRKHVEFR....IDNI... Cluster:6 d1o6ue1 a.5.3.1 ........PRQKEALAKFRENV.............FLLRWLRARSFDLQKSEAXLRKHVEFR....IDNI... Cluster:6 d1olma1 a.5.3.1 ........PRQKEALAKFRENV.............FLLRWLRARSFDLQKSEAMLRKHVEFR....IDNI... Cluster:6 d1olmc1 a.5.3.1 ........PRQKEALAKFRENV.............FLLRWLRARSFDLQKSEAMLRKHVEFR....IDNI... Cluster:6 d1olme1 a.5.3.1 ........PRQKEALAKFRENV.............FLLRWLRARSFDLQKSEAMLRKHVEFR....IDNI... Cluster:6 d1xb2b1 a.5.2.2 ........ASSKELLMKLRRKT.............NCKKALETCGGDLKQAESWLHKQAQKE....SKAA... # STRALCP results (SPANS in common) for: d1o6ua1 d1o6ua1 10-23 10_A:23_A PRQKEALAKFRENV d1o6ua1 37-63 37_A:63_A FLLRWLRARSFDLQKSEAXLRKHVEFR d1o6ua1 68-71 68_A:71_A IDNI # STRALCP results (SPANS in common) for: d1aua_1 d1aua_1 28-41 31:44 SAQEKALAELRKLL d1aua_1 54-80 57:83 TLLRFLRARKFDVQLAKEMFENCEKWR d1aua_1 85-88 88:91 TDTI # STRALCP results (SPANS in common) for: d1o6uc1 d1o6uc1 10-23 10_C:23_C PRQKEALAKFRENV d1o6uc1 37-63 37_C:63_C FLLRWLRARSFDLQKSEAXLRKHVEFR d1o6uc1 68-71 68_C:71_C IDNI # STRALCP results (SPANS in common) for: d1o6ue1 d1o6ue1 10-23 10_E:23_E PRQKEALAKFRENV d1o6ue1 37-63 37_E:63_E FLLRWLRARSFDLQKSEAXLRKHVEFR d1o6ue1 68-71 68_E:71_E IDNI # STRALCP results (SPANS in common) for: d1olma1 d1olma1 10-23 10_A:23_A PRQKEALAKFRENV d1olma1 37-63 37_A:63_A FLLRWLRARSFDLQKSEAMLRKHVEFR d1olma1 68-71 68_A:71_A IDNI # STRALCP results (SPANS in common) for: d1olmc1 d1olmc1 10-23 10_C:23_C PRQKEALAKFRENV d1olmc1 37-63 37_C:63_C FLLRWLRARSFDLQKSEAMLRKHVEFR d1olmc1 68-71 68_C:71_C IDNI # STRALCP results (SPANS in common) for: d1olme1 d1olme1 10-23 10_E:23_E PRQKEALAKFRENV d1olme1 37-63 37_E:63_E FLLRWLRARSFDLQKSEAMLRKHVEFR d1olme1 68-71 68_E:71_E IDNI # STRALCP results (SPANS in common) for: d1xb2b1 d1xb2b1 2-15 57_B:70_B ASSKELLMKLRRKT d1xb2b1 21-47 76_B:102_B NCKKALETCGGDLKQAESWLHKQAQKE d1xb2b1 50-53 105_B:108_B SKAA END_of_CLUSTER ............................... CLUSTER_NB: 7 Nb_of_members(1): 4 Reference_name: d1nvmg1 Length: 51 Nb_of_matches: 47 Nb_of_spans: 1 Nb_of_slots: 6 Cluster Name Class ###############################################.. Cluster:7 d1nvmg1 a.5.7.1 SSFLRHAEIAAAKYNLKTLDILVELGHRRMVGGQEDMIVDVALDLLA.. Cluster:7 d1nvma1 a.5.7.1 SSFLRHAEIAAAKYNLKTLDILVELGHRRMVGGQEDMIVDVALDLLA.. Cluster:7 d1nvmc1 a.5.7.1 SSFLRHAEIAAAKYNLKTLDILVELGHRRMVGGQEDMIVDVALDLLA.. Cluster:7 d1nvme1 a.5.7.1 SSFLRHAEIAAAKYNLKTLDILVELGHRRMVGGQEDMIVDVALDLLA.. # STRALCP results (SPANS in common) for: d1nvmg1 d1nvmg1 2-48 292_G:338_G SSFLRHAEIAAAKYNLKTLDILVELGHRRMVGGQEDMIVDVALDLLA # STRALCP results (SPANS in common) for: d1nvma1 d1nvma1 2-48 292_A:338_A SSFLRHAEIAAAKYNLKTLDILVELGHRRMVGGQEDMIVDVALDLLA # STRALCP results (SPANS in common) for: d1nvmc1 d1nvmc1 2-48 292_C:338_C SSFLRHAEIAAAKYNLKTLDILVELGHRRMVGGQEDMIVDVALDLLA # STRALCP results (SPANS in common) for: d1nvme1 d1nvme1 2-48 292_E:338_E SSFLRHAEIAAAKYNLKTLDILVELGHRRMVGGQEDMIVDVALDLLA END_of_CLUSTER ............................. CLUSTER_NB: 8 Nb_of_members(1): 6 Reference_name: d1rqba1 Length: 168 Nb_of_matches: 166 Nb_of_spans: 1 Nb_of_slots: 17 Cluster Name Class ###################################################################################################################################################################### Cluster:8 d1rqba1 a.5.7.2 PGGXLSNXESQLRAQGAEDKXDEVXAEVPRVRKAAGFPPLVTPSSQIVGTQAVFNVXXGEYKRXTGEFADIXLGYYGASPADRDPKVVKLAEEQSGKKPITQRPADLLPPEWEKQSKEAATLKGFNGTDEDVLTYALFPQVAPVFFEHRAEGPHSVALTDAQLKAE Cluster:8 d1rqea1 a.5.7.2 PGGMLSNMESQLRAQGAEDKMDEVMAEVPRVRKAAGFPPLVTPSSQIVGTQAVFNVMMGEYKRMTGEFADIMLGYYGASPADRDPKVVKLAEEQSGKKPITQRPADLLPPEWEKQSKEAATLKGFNGTDEDVLTYALFPQVAPVFFEHRAEGPHSVALTDAQLKAE Cluster:8 d1rqha1 a.5.7.2 PGGMLSNMESQLRAQGAEDKMDEVMAEVPRVRKAAGFPPLVTPSSQIVGTQAVFNVMMGEYKRMTGEFADIMLGYYGASPADRDPKVVKLAEEQSGKKPITQRPADLLPPEWEKQSKEAATLKGFNGTDEDVLTYALFPQVAPVFFEHRAEGPHSVALTDAQLKAE Cluster:8 d1rr2a1 a.5.7.2 PGGMLSNMESQLRAQGAEDKMDEVMAEVPRVRKAAGFPPLVTPSSQIVGTQAVFNVMMGEYKRMTGEFADIMLGYYGASPADRDPKVVKLAEEQSGKKPITQRPADLLPPEWEKQSKEAATLKGFNGTDEDVLTYALFPQVAPVFFEHRAEGPHSVALTDAQLKAE Cluster:8 d1s3ha1 a.5.7.2 PGGMLSNMESQLRAQGAEDKMDEVMAEVPRVRKAAGFPPLVTPSSQIVGTQAVFNVMMGEYKRMTGEFADIMLGYYGASPADRDPKVVKLAEEQSGKKPITQRPADLLPPEWEKQSKEAATLKGFNGTDEDVLTYALFPQVAPVFFEHRAEGPHSVALTDAQLKAE Cluster:8 d1u5ja1 a.5.7.2 PGGMLSNMESQLRAQGAEDKMDEVMAEVPRVRKAAGFPPLVTPSSQIVGTQAVFNVMMGEYKRMTGEFADIMLGYYGASPADRDPKVVKLAEEQSGKKPITQRPADLLPPEWEKQSKEAATLKGFNGTDEDVLTYALFPQVAPVFFEHRAEGPHSVALTDAQLKAE # STRALCP results (SPANS in common) for: d1rqba1 d1rqba1 2-167 308_A:473_A PGGXLSNXESQLRAQGAEDKXDEVXAEVPRVRKAAGFPPLVTPSSQIVGTQAVFNVXXGEYKRXTGEFADIXLGYYGASPADRDPKVVKLAEEQSGKKPITQRPADLLPPEWEKQSKEAATLKGFNGTDEDVLTYALFPQVAPVFFEHRAEGPHSVALTDAQLKAE # STRALCP results (SPANS in common) for: d1rqea1 d1rqea1 2-167 308_A:473_A PGGMLSNMESQLRAQGAEDKMDEVMAEVPRVRKAAGFPPLVTPSSQIVGTQAVFNVMMGEYKRMTGEFADIMLGYYGASPADRDPKVVKLAEEQSGKKPITQRPADLLPPEWEKQSKEAATLKGFNGTDEDVLTYALFPQVAPVFFEHRAEGPHSVALTDAQLKAE # STRALCP results (SPANS in common) for: d1rqha1 d1rqha1 2-167 308_A:473_A PGGMLSNMESQLRAQGAEDKMDEVMAEVPRVRKAAGFPPLVTPSSQIVGTQAVFNVMMGEYKRMTGEFADIMLGYYGASPADRDPKVVKLAEEQSGKKPITQRPADLLPPEWEKQSKEAATLKGFNGTDEDVLTYALFPQVAPVFFEHRAEGPHSVALTDAQLKAE # STRALCP results (SPANS in common) for: d1rr2a1 d1rr2a1 2-167 308_A:473_A PGGMLSNMESQLRAQGAEDKMDEVMAEVPRVRKAAGFPPLVTPSSQIVGTQAVFNVMMGEYKRMTGEFADIMLGYYGASPADRDPKVVKLAEEQSGKKPITQRPADLLPPEWEKQSKEAATLKGFNGTDEDVLTYALFPQVAPVFFEHRAEGPHSVALTDAQLKAE # STRALCP results (SPANS in common) for: d1s3ha1 d1s3ha1 2-167 308_A:473_A PGGMLSNMESQLRAQGAEDKMDEVMAEVPRVRKAAGFPPLVTPSSQIVGTQAVFNVMMGEYKRMTGEFADIMLGYYGASPADRDPKVVKLAEEQSGKKPITQRPADLLPPEWEKQSKEAATLKGFNGTDEDVLTYALFPQVAPVFFEHRAEGPHSVALTDAQLKAE # STRALCP results (SPANS in common) for: d1u5ja1 d1u5ja1 2-167 308_A:473_A PGGMLSNMESQLRAQGAEDKMDEVMAEVPRVRKAAGFPPLVTPSSQIVGTQAVFNVMMGEYKRMTGEFADIMLGYYGASPADRDPKVVKLAEEQSGKKPITQRPADLLPPEWEKQSKEAATLKGFNGTDEDVLTYALFPQVAPVFFEHRAEGPHSVALTDAQLKAE END_of_CLUSTER ......................... CLUSTER_NB: 9 Nb_of_members(1): 4 Reference_name: d1ifya_ Length: 49 Nb_of_matches: 27 Nb_of_spans: 2 Nb_of_slots: 5 Cluster Name Class .......######################........#####..... Cluster:9 d1ifya_ a.5.2.1 .......ETMLTEIMSMGYERERVVAALR........AVEYL..... Cluster:9 d1ttea1 a.5.2.1 .......HDLIDEFESQGFEKDKIVEVLR........IIEEL..... Cluster:9 d1wgna_ a.5.2.1 .......RQCVETVVNMGYSYECVLRAMK........ILDYL..... Cluster:9 d1wjia_ a.5.2.1 .......EKALKHITEMGFSKEASRQALM........ALNVL..... # STRALCP results (SPANS in common) for: d1ifya_ d1ifya_ 9-30 164_A:185_A ETMLTEIMSMGYERERVVAALR d1ifya_ 39-43 194_A:198_A AVEYL # STRALCP results (SPANS in common) for: d1ttea1 d1ttea1 10-31 170_A:191_A HDLIDEFESQGFEKDKIVEVLR d1ttea1 49-53 209_A:213_A IIEEL # STRALCP results (SPANS in common) for: d1wgna_ d1wgna_ 20-41 20_A:41_A RQCVETVVNMGYSYECVLRAMK d1wgna_ 50-54 50_A:54_A ILDYL # STRALCP results (SPANS in common) for: d1wjia_ d1wjia_ 10-31 10_A:31_A EKALKHITEMGFSKEASRQALM d1wjia_ 40-44 40_A:44_A ALNVL END_of_CLUSTER ...................... CLUSTER_NB: 10 Nb_of_members(1): 4 Reference_name: d1efud3 Length: 54 Nb_of_matches: 35 Nb_of_spans: 3 Nb_of_slots: 5 Cluster Name Class ...###########..###########..#############.......... Cluster:10 d1efud3 a.5.2.2 ...ASLVKELRERT..GMMDCKKALTE..GDIELAIENMRKS.......... Cluster:10 d1aiph1 a.5.2.2 ...MELIKKLREAT..GMMDVKRALED..WDEEKAVQLLRER.......... Cluster:10 d1efub3 a.5.2.2 ...ASLVKELRERT..GMMDCKKALTE..GDIELAIENMRKS.......... Cluster:10 d1wgla_ a.5.2.4 ...EEDLKAIQDMF..DQEVIRSVLEA..GNKDAAINSLLQM.......... # STRALCP results (SPANS in common) for: d1efud3 d1efud3 5-15 5_D:15_D ASLVKELRERT d1efud3 18-28 18_D:28_D GMMDCKKALTE d1efud3 31-43 31_D:43_D GDIELAIENMRKS # STRALCP results (SPANS in common) for: d1aiph1 d1aiph1 2-12 4_H:14_H MELIKKLREAT d1aiph1 15-25 17_H:27_H GMMDVKRALED d1aiph1 28-40 30_H:42_H WDEEKAVQLLRER # STRALCP results (SPANS in common) for: d1efub3 d1efub3 5-15 5_B:15_B ASLVKELRERT d1efub3 18-28 18_B:28_B GMMDCKKALTE d1efub3 31-43 31_B:43_B GDIELAIENMRKS # STRALCP results (SPANS in common) for: d1wgla_ d1wgla_ 10-20 10_A:20_A EEDLKAIQDMF d1wgla_ 24-34 24_A:34_A DQEVIRSVLEA d1wgla_ 37-49 37_A:49_A GNKDAAINSLLQM END_of_CLUSTER .................... CLUSTER_NB: 11 Nb_of_members(1): 2 Reference_name: d1oizb1 Length: 80 Nb_of_matches: 77 Nb_of_spans: 2 Nb_of_slots: 9 Cluster Name Class ##############################.############################################### Cluster:11 d1oizb1 a.5.3.1 PQLNALPDHSPLLQPGLAALRRRAREAGVP.APLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHP Cluster:11 d1oiza1 a.5.3.1 PQLNALPDHSPLLQPGLAALRRRAREAGVP.APLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHP # STRALCP results (SPANS in common) for: d1oizb1 d1oizb1 2-31 12_B:41_B PQLNALPDHSPLLQPGLAALRRRAREAGVP d1oizb1 33-79 43_B:89_B APLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHP # STRALCP results (SPANS in common) for: d1oiza1 d1oiza1 4-33 12_A:41_A PQLNALPDHSPLLQPGLAALRRRAREAGVP d1oiza1 35-81 43_A:89_A APLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHP END_of_CLUSTER .................. CLUSTER_NB: 12 Nb_of_members(1): 2 Reference_name: d1sr9b1 Length: 44 Nb_of_matches: 40 Nb_of_spans: 2 Nb_of_slots: 5 Cluster Name Class #########################..############### Cluster:12 d1sr9b1 a.5.7.1 AYIXKTDHGLSLPRRLQIEFSQVIQ..SPKEXWDAFAEEYLA Cluster:12 d1sr9a1 a.5.7.1 AYIXKTDHGLSLPRRLQIEFSQVIQ..SPKEXWDAFAEEYLA # STRALCP results (SPANS in common) for: d1sr9b1 d1sr9b1 2-26 438_B:462_B AYIXKTDHGLSLPRRLQIEFSQVIQ d1sr9b1 29-43 476_B:490_B SPKEXWDAFAEEYLA # STRALCP results (SPANS in common) for: d1sr9a1 d1sr9a1 2-26 438_A:462_A AYIXKTDHGLSLPRRLQIEFSQVIQ d1sr9a1 31-45 476_A:490_A SPKEXWDAFAEEYLA END_of_CLUSTER ................ CLUSTER_NB: 13 Nb_of_members(1): 2 Reference_name: d1t95a1 Length: 75 Nb_of_matches: 64 Nb_of_spans: 2 Nb_of_slots: 8 Cluster Name Class ......###########################...##################################### Cluster:13 d1t95a1 a.5.8.1 ......TAEQRREXLEAKRKQIINFISRNTIDP...APHPPSRIERALEEAKVHIDIFKSVEAQVKDIVKALK Cluster:13 d1p9qc1 a.5.8.1 ......TAEQRREMLEAKRKQIINFISRNTIDP...APHPPSRIERALEEAKVHIDIFKSVEAQVKDIVKALK # STRALCP results (SPANS in common) for: d1t95a1 d1t95a1 8-34 94_A:120_A TAEQRREXLEAKRKQIINFISRNTIDP d1t95a1 38-74 124_A:160_A APHPPSRIERALEEAKVHIDIFKSVEAQVKDIVKALK # STRALCP results (SPANS in common) for: d1p9qc1 d1p9qc1 2-28 88_C:114_C TAEQRREMLEAKRKQIINFISRNTIDP d1p9qc1 29-65 118_C:154_C APHPPSRIERALEEAKVHIDIFKSVEAQVKDIVKALK END_of_CLUSTER ............... CLUSTER_NB: 14 Nb_of_members(1): 1 Reference_name: d1eija_ Length: 72 Nb_of_matches: 70 Nb_of_spans: 1 Nb_of_slots: 8 Cluster Name Class ###################################################################### Cluster:14 d1eija_ a.5.6.1 RQQLEMQKKQIMMQILTPEARSRLANLRLTRPDFVEQIELQLIQLAQMGRVRSKITDEQLKELLKRVAGK # STRALCP results (SPANS in common) for: d1eija_ d1eija_ 2-71 2_A:71_A RQQLEMQKKQIMMQILTPEARSRLANLRLTRPDFVEQIELQLIQLAQMGRVRSKITDEQLKELLKRVAGK END_of_CLUSTER .............. CLUSTER_NB: 15 Nb_of_members(1): 1 Reference_name: d1enwa_ Length: 114 Nb_of_matches: 112 Nb_of_spans: 1 Nb_of_slots: 12 Cluster Name Class ################################################################################################################ Cluster:15 d1enwa_ a.5.4.1 SHMPRNSKNDGVDTAIYHHKLRDQVLKALYDVLAKESEHPPQSILHTAKAIESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPA # STRALCP results (SPANS in common) for: d1enwa_ d1enwa_ 2-113 2_A:113_A SHMPRNSKNDGVDTAIYHHKLRDQVLKALYDVLAKESEHPPQSILHTAKAIESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPA END_of_CLUSTER ............. CLUSTER_NB: 16 Nb_of_members(1): 1 Reference_name: d1go5a_ Length: 69 Nb_of_matches: 67 Nb_of_spans: 1 Nb_of_slots: 7 Cluster Name Class ################################################################### Cluster:16 d1go5a_ a.5.2.3 APTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKAKGEIPEVAFM # STRALCP results (SPANS in common) for: d1go5a_ d1go5a_ 2-68 3_A:69_A APTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKAKGEIPEVAFM END_of_CLUSTER ............ CLUSTER_NB: 17 Nb_of_members(1): 1 Reference_name: d1p3qq_ Length: 45 Nb_of_matches: 43 Nb_of_spans: 1 Nb_of_slots: 5 Cluster Name Class ########################################### Cluster:17 d1p3qq_ a.5.2.4 SLIKKIEENERKDTLNTLQNXFPDXDPSLIEDVCIAAASGPCV # STRALCP results (SPANS in common) for: d1p3qq_ d1p3qq_ 2-44 399_Q:443_Q SLIKKIEENERKDTLNTLQNXFPDXDPSLIEDVCIAAASGPCV END_of_CLUSTER ........... CLUSTER_NB: 18 Nb_of_members(1): 1 Reference_name: d1mn3a_ Length: 54 Nb_of_matches: 52 Nb_of_spans: 1 Nb_of_slots: 6 Cluster Name Class #################################################### Cluster:18 d1mn3a_ a.5.2.4 SLIKKIEENERKDTLNTLQNXFPDXDPSLIEDVCIAKKSRIEPCVDALLSLS # STRALCP results (SPANS in common) for: d1mn3a_ d1mn3a_ 2-53 399_A:450_A SLIKKIEENERKDTLNTLQNXFPDXDPSLIEDVCIAKKSRIEPCVDALLSLS END_of_CLUSTER .......... CLUSTER_NB: 19 Nb_of_members(1): 1 Reference_name: d1p3qr_ Length: 36 Nb_of_matches: 34 Nb_of_spans: 1 Nb_of_slots: 4 Cluster Name Class ################################## Cluster:19 d1p3qr_ a.5.2.4 QNXFPDXDPSLIEDVCIAAASRIGPCVDALLSLS # STRALCP results (SPANS in common) for: d1p3qr_ d1p3qr_ 2-35 417_R:450_R QNXFPDXDPSLIEDVCIAAASRIGPCVDALLSLS END_of_CLUSTER ......... CLUSTER_NB: 20 Nb_of_members(1): 1 Reference_name: d1q02a_ Length: 52 Nb_of_matches: 50 Nb_of_spans: 1 Nb_of_slots: 6 Cluster Name Class ################################################## Cluster:20 d1q02a_ a.5.2.1 SPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTIQYSK # STRALCP results (SPANS in common) for: d1q02a_ d1q02a_ 2-51 2_A:51_A SPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTIQYSK END_of_CLUSTER ........ CLUSTER_NB: 21 Nb_of_members(1): 1 Reference_name: d1t3ta1 Length: 68 Nb_of_matches: 66 Nb_of_spans: 1 Nb_of_slots: 7 Cluster Name Class ################################################################## Cluster:21 d1t3ta1 a.5.10.1 QPAPVSSVDLLGEGRQALIDANLRLGLALAEDEIDYLQEAFTKLGRNPNDIELYMFAQANSEHCRH # STRALCP results (SPANS in common) for: d1t3ta1 d1t3ta1 2-67 154_A:219_A QPAPVSSVDLLGEGRQALIDANLRLGLALAEDEIDYLQEAFTKLGRNPNDIELYMFAQANSEHCRH END_of_CLUSTER ....... CLUSTER_NB: 22 Nb_of_members(1): 1 Reference_name: d1ufza_ Length: 83 Nb_of_matches: 81 Nb_of_spans: 1 Nb_of_slots: 9 Cluster Name Class ################################################################################# Cluster:22 d1ufza_ a.5.9.1 SSGSSGEYGYEDLRESSNSLLNHQLSEIDQARLYSCLDHMREVLGDAVPDDILTEAILKHKFDVQKALSVVLEQDGSGPSS # STRALCP results (SPANS in common) for: d1ufza_ d1ufza_ 2-82 2_A:82_A SSGSSGEYGYEDLRESSNSLLNHQLSEIDQARLYSCLDHMREVLGDAVPDDILTEAILKHKFDVQKALSVVLEQDGSGPSS END_of_CLUSTER ...... CLUSTER_NB: 23 Nb_of_members(1): 1 Reference_name: d1vdla_ Length: 80 Nb_of_matches: 78 Nb_of_spans: 1 Nb_of_slots: 9 Cluster Name Class ############################################################################## Cluster:23 d1vdla_ a.5.2.1 SSGSSGMTVEQNVLQQSAAQKHQQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKNAKTPPQEETSGPSS # STRALCP results (SPANS in common) for: d1vdla_ d1vdla_ 2-79 2_A:79_A SSGSSGMTVEQNVLQQSAAQKHQQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKNAKTPPQEETSGPSS END_of_CLUSTER ..... CLUSTER_NB: 24 Nb_of_members(1): 1 Reference_name: d1vega_ Length: 83 Nb_of_matches: 81 Nb_of_spans: 1 Nb_of_slots: 9 Cluster Name Class ################################################################################# Cluster:24 d1vega_ a.5.2.1 SSGSSGNPHMWWLQDADPENNSRQASPSQESINQLVYMGFDTVVAEAALRVFGGNVQLAAQTLAHHGGSLPPDLQFSGPSS # STRALCP results (SPANS in common) for: d1vega_ d1vega_ 2-82 2_A:82_A SSGSSGNPHMWWLQDADPENNSRQASPSQESINQLVYMGFDTVVAEAALRVFGGNVQLAAQTLAHHGGSLPPDLQFSGPSS END_of_CLUSTER .... CLUSTER_NB: 25 Nb_of_members(1): 1 Reference_name: d1veka_ Length: 84 Nb_of_matches: 82 Nb_of_spans: 1 Nb_of_slots: 9 Cluster Name Class ################################################################################## Cluster:25 d1veka_ a.5.2.1 SSGSSGGEELLPDGVPEEVMESAQPVANEEIVAQLVSMGFSQLHCQKAAINTSNAGVEEAMNWLLSHMDDPDIDAPISGPSS # STRALCP results (SPANS in common) for: d1veka_ d1veka_ 2-83 2_A:83_A SSGSSGGEELLPDGVPEEVMESAQPVANEEIVAQLVSMGFSQLHCQKAAINTSNAGVEEAMNWLLSHMDDPDIDAPISGPSS END_of_CLUSTER ... CLUSTER_NB: 26 Nb_of_members(1): 1 Reference_name: d1vg5a_ Length: 73 Nb_of_matches: 71 Nb_of_spans: 1 Nb_of_slots: 8 Cluster Name Class ####################################################################### Cluster:26 d1vg5a_ a.5.2.1 SSGSSGSRQAPIANAAVLPQSQGRVAASEEQIQKLVAMGFDRTQVEVALAAADDDLTVAVEILMSQSGPSS # STRALCP results (SPANS in common) for: d1vg5a_ d1vg5a_ 2-72 2_A:72_A SSGSSGSRQAPIANAAVLPQSQGRVAASEEQIQKLVAMGFDRTQVEVALAAADDDLTVAVEILMSQSGPSS END_of_CLUSTER .. CLUSTER_NB: 27 Nb_of_members(1): 1 Reference_name: d1whca_ Length: 64 Nb_of_matches: 62 Nb_of_spans: 1 Nb_of_slots: 7 Cluster Name Class ############################################################## Cluster:27 d1whca_ a.5.2.1 SSGSSGAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLSGPSS # STRALCP results (SPANS in common) for: d1whca_ d1whca_ 2-63 2_A:63_A SSGSSGAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLSGPSS END_of_CLUSTER . CLUSTER_NB: 28 Nb_of_members(1): 1 Reference_name: d1wiva_ Length: 73 Nb_of_matches: 71 Nb_of_spans: 1 Nb_of_slots: 8 Cluster Name Class ####################################################################### Cluster:28 d1wiva_ a.5.2.1 SSGSSGLLSHMDDPDIDAPISHQTSDIDQSSVDTLLSFGFAEDVARKALKASGGDIEKATDWVFNNSGPSS # STRALCP results (SPANS in common) for: d1wiva_ d1wiva_ 2-72 2_A:72_A SSGSSGLLSHMDDPDIDAPISHQTSDIDQSSVDTLLSFGFAEDVARKALKASGGDIEKATDWVFNNSGPSS END_of_CLUSTER Calculated number of clusters: 28 END of job