STRALCP - Structure Alignment-based Clustering of Proteins (based on Identified Structurally Conserved Spans). Version: (08/16/2007) Questions or comments please send to Adam Zemla (adamz@llnl.gov) Parameters for the clustering program: Length of slots: 10 (empty: 0.20 boundaries: 0.20) Length of spans: 3 Cutoff for LGA_S score: 60.00 (refinement: 0.20) STRALCP data: SCOP_a_137.ok/TMP List of molecules: STRAL_a_137_L1 Name: d1a0rg_ a.137.3.1 65 1 Name: d1b9xb_ a.137.3.1 68 2 Name: d1b9yb_ a.137.3.1 68 3 Name: d1dp5b_ a.137.7.1 31 4 Name: d1dpjb_ a.137.7.1 29 5 Name: d1e79i_ a.137.8.1 47 6 Name: d1ef1c_ a.137.5.1 90 7 Name: d1ef1d_ a.137.5.1 90 8 Name: d1ffky_ a.137.1.1 31 9 Name: d1g0vb_ a.137.7.1 29 10 Name: d1g72b_ a.137.2.1 57 11 Name: d1g72d_ a.137.2.1 57 12 Name: d1gg2g_ a.137.3.1 54 13 Name: d1gotg_ a.137.3.1 58 14 Name: d1gp2g_ a.137.3.1 54 15 Name: d1h4ib_ a.137.2.1 73 16 Name: d1h4id_ a.137.2.1 73 17 Name: d1h4jb_ a.137.2.1 72 18 Name: d1h4jd_ a.137.2.1 72 19 Name: d1h4jf_ a.137.2.1 72 20 Name: d1h4jh_ a.137.2.1 72 21 Name: d1h8ei_ a.137.8.1 36 22 Name: d1hfes_ a.137.4.1 88 23 Name: d1hfet_ a.137.4.1 88 24 Name: d1jj21_ a.137.1.1 46 25 Name: d1jjuc_ a.137.9.1 78 26 Name: d1jmxg_ a.137.9.1 76 27 Name: d1jmzg_ a.137.9.1 76 28 Name: d1k733_ a.137.1.1 46 29 Name: d1k8a3_ a.137.1.1 46 30 Name: d1k9m3_ a.137.1.1 46 31 Name: d1kc83_ a.137.1.1 46 32 Name: d1kd13_ a.137.1.1 46 33 Name: d1kqs1_ a.137.1.1 46 34 Name: d1lrwb_ a.137.2.1 83 35 Name: d1lrwd_ a.137.2.1 83 36 Name: d1m1k3_ a.137.1.1 46 37 Name: d1m903_ a.137.1.1 46 38 Name: d1n8r3_ a.137.1.1 46 39 Name: d1nji3_ a.137.1.1 46 40 Name: d1omwg_ a.137.3.1 60 41 Name: d1pbyc_ a.137.9.1 78 42 Name: d1q7y3_ a.137.1.1 46 43 Name: d1q813_ a.137.1.1 46 44 Name: d1q823_ a.137.1.1 46 45 Name: d1q863_ a.137.1.1 46 46 Name: d1qvf1_ a.137.1.1 46 47 Name: d1qvg1_ a.137.1.1 46 48 Name: d1rp3b_ a.137.11.1 77 49 Name: d1rp3d_ a.137.11.1 70 50 Name: d1rp3f_ a.137.11.1 64 51 Name: d1rp3h_ a.137.11.1 70 52 Name: d1s722_ a.137.1.1 46 53 Name: d1sa0e_ a.137.10.1 124 54 Name: d1sa1e_ a.137.10.1 134 55 Name: d1sc5b_ a.137.11.1 72 56 Name: d1tbge_ a.137.3.1 68 57 Name: d1tbgf_ a.137.3.1 65 58 Name: d1tbgg_ a.137.3.1 65 59 Name: d1tbgh_ a.137.3.1 65 60 Name: d1w6sb_ a.137.2.1 72 61 Name: d1w6sd_ a.137.2.1 72 62 Name: d2trcg_ a.137.3.1 68 63 Name: d4aahb_ a.137.2.1 69 64 Name: d4aahd_ a.137.2.1 69 65 Total number of members: 65 .............................. CLUSTER_NB: 1 Nb_of_members(1): 19 Reference_name: d1q823_ Length: 46 Nb_of_matches: 29 Nb_of_spans: 1 Nb_of_slots: 4 Cluster Name Class #############################............... Cluster:1 d1q823_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1ffky_ a.137.1.1 KKSKATKKRKAKLDNQNSRVPAYVMLKTD............... Cluster:1 d1jj21_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1k733_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1k8a3_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1k9m3_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1kc83_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1kd13_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1kqs1_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1m1k3_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1m903_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1n8r3_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1nji3_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1q7y3_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1q813_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1q863_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1qvf1_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1qvg1_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... Cluster:1 d1s722_ a.137.1.1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD............... # STRALCP results (SPANS in common) for: d1q823_ d1q823_ 2-30 2_3:30_3 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1ffky_ d1ffky_ 2-30 2_Y:48_Y KKSKATKKRKAKLDNQNSRVPAYVMLKTD # STRALCP results (SPANS in common) for: d1jj21_ d1jj21_ 2-30 2_1:30_1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1k733_ d1k733_ 2-30 2_3:30_3 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1k8a3_ d1k8a3_ 2-30 2_3:30_3 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1k9m3_ d1k9m3_ 2-30 2_3:30_3 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1kc83_ d1kc83_ 2-30 2_3:30_3 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1kd13_ d1kd13_ 2-30 2_3:30_3 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1kqs1_ d1kqs1_ 2-30 2_1:30_1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1m1k3_ d1m1k3_ 2-30 2_3:30_3 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1m903_ d1m903_ 2-30 2_3:30_3 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1n8r3_ d1n8r3_ 2-30 2_3:30_3 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1nji3_ d1nji3_ 2-30 2_3:30_3 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1q7y3_ d1q7y3_ 2-30 2_3:30_3 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1q813_ d1q813_ 2-30 2_3:30_3 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1q863_ d1q863_ 2-30 2_3:30_3 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1qvf1_ d1qvf1_ 2-30 2_1:30_1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1qvg1_ d1qvg1_ 2-30 2_1:30_1 KKSKATKKRLAKLDNQNSRVPAWVMLKTD # STRALCP results (SPANS in common) for: d1s722_ d1s722_ 2-30 2_2:30_2 KKSKATKKRLAKLDNQNSRVPAWVMLKTD END_of_CLUSTER ..................... CLUSTER_NB: 2 Nb_of_members(1): 12 Reference_name: d1tbgh_ Length: 65 Nb_of_matches: 51 Nb_of_spans: 2 Nb_of_slots: 6 Cluster Name Class ..........############################################.#######. Cluster:2 d1tbgh_ a.137.3.1 ..........KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK.IPEDKNP. Cluster:2 d1a0rg_ a.137.3.1 ..........KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK.IPEDKNP. Cluster:2 d1b9xb_ a.137.3.1 ..........KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK.IPEDKNP. Cluster:2 d1b9yb_ a.137.3.1 ..........KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK.IPEDKNP. Cluster:2 d1gg2g_ a.137.3.1 ..........IAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLT.VPASENP. Cluster:2 d1gotg_ a.137.3.1 ..........KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK.IPEDKNP. Cluster:2 d1gp2g_ a.137.3.1 ..........IAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLT.VPASENP. Cluster:2 d1omwg_ a.137.3.1 ..........IAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLT.VPASENP. Cluster:2 d1tbge_ a.137.3.1 ..........KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK.IPEDKNP. Cluster:2 d1tbgf_ a.137.3.1 ..........KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK.IPEDKNP. Cluster:2 d1tbgg_ a.137.3.1 ..........KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK.IPEDKNP. Cluster:2 d2trcg_ a.137.3.1 ..........KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK.IPEDKNP. # STRALCP results (SPANS in common) for: d1tbgh_ d1tbgh_ 12-55 512_H:555_H KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK d1tbgh_ 57-63 557_H:563_H IPEDKNP # STRALCP results (SPANS in common) for: d1a0rg_ d1a0rg_ 11-54 12_G:55_G KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK d1a0rg_ 56-62 57_G:63_G IPEDKNP # STRALCP results (SPANS in common) for: d1b9xb_ d1b9xb_ 12-55 512_B:555_B KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK d1b9xb_ 57-63 557_B:563_B IPEDKNP # STRALCP results (SPANS in common) for: d1b9yb_ d1b9yb_ 12-55 512_B:555_B KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK d1b9yb_ 57-63 557_B:563_B IPEDKNP # STRALCP results (SPANS in common) for: d1gg2g_ d1gg2g_ 2-45 9_G:52_G IAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLT d1gg2g_ 47-53 54_G:60_G VPASENP # STRALCP results (SPANS in common) for: d1gotg_ d1gotg_ 4-47 12_G:55_G KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK d1gotg_ 49-55 57_G:63_G IPEDKNP # STRALCP results (SPANS in common) for: d1gp2g_ d1gp2g_ 2-45 9_G:52_G IAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLT d1gp2g_ 47-53 54_G:60_G VPASENP # STRALCP results (SPANS in common) for: d1omwg_ d1omwg_ 2-45 9_G:52_G IAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLT d1omwg_ 47-53 54_G:60_G VPASENP # STRALCP results (SPANS in common) for: d1tbge_ d1tbge_ 12-55 512_E:555_E KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK d1tbge_ 57-63 557_E:563_E IPEDKNP # STRALCP results (SPANS in common) for: d1tbgf_ d1tbgf_ 12-55 512_F:555_F KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK d1tbgf_ 57-63 557_F:563_F IPEDKNP # STRALCP results (SPANS in common) for: d1tbgg_ d1tbgg_ 12-55 512_G:555_G KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK d1tbgg_ 57-63 557_G:563_G IPEDKNP # STRALCP results (SPANS in common) for: d2trcg_ d2trcg_ 12-55 512_G:555_G KDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVK d2trcg_ 57-63 557_G:563_G IPEDKNP END_of_CLUSTER ................ CLUSTER_NB: 3 Nb_of_members(1): 14 Reference_name: d4aahd_ Length: 69 Nb_of_matches: 55 Nb_of_spans: 1 Nb_of_slots: 6 Cluster Name Class #######################################################............ Cluster:3 d4aahd_ a.137.2.1 DGQNCKEPGNCWENKPGYPEKIAGSKYDPKHDPVELNKQEESIKAMDARNAKRIA............ Cluster:3 d1g72b_ a.137.2.1 DGQNCKEPGNCWENKPGYPEKIAGSKYDPKHDPVELNKQEESIKAMDARNAKRIA............ Cluster:3 d1g72d_ a.137.2.1 DGQNCKEPGNCWENKPGYPEKIAGSKYDPKHDPVELNKQEESIKAMDARNAKRIA............ Cluster:3 d1h4ib_ a.137.2.1 DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE............ Cluster:3 d1h4id_ a.137.2.1 DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE............ Cluster:3 d1h4jb_ a.137.2.1 DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE............ Cluster:3 d1h4jd_ a.137.2.1 DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE............ Cluster:3 d1h4jf_ a.137.2.1 DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE............ Cluster:3 d1h4jh_ a.137.2.1 DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE............ Cluster:3 d1lrwb_ a.137.2.1 DGTNCKAPGNCWEPKPDYPAKVEGSKYDPQHDPAELSKQGESLAVMDARNEWRVW............ Cluster:3 d1lrwd_ a.137.2.1 DGTNCKAPGNCWEPKPDYPAKVEGSKYDPQHDPAELSKQGESLAVMDARNEWRVW............ Cluster:3 d1w6sb_ a.137.2.1 DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE............ Cluster:3 d1w6sd_ a.137.2.1 DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE............ Cluster:3 d4aahb_ a.137.2.1 DGQNCKEPGNCWENKPGYPEKIAGSKYDPKHDPVELNKQEESIKAMDARNAKRIA............ # STRALCP results (SPANS in common) for: d4aahd_ d4aahd_ 2-56 2_D:56_D DGQNCKEPGNCWENKPGYPEKIAGSKYDPKHDPVELNKQEESIKAMDARNAKRIA # STRALCP results (SPANS in common) for: d1g72b_ d1g72b_ 2-56 2_B:56_B DGQNCKEPGNCWENKPGYPEKIAGSKYDPKHDPVELNKQEESIKAMDARNAKRIA # STRALCP results (SPANS in common) for: d1g72d_ d1g72d_ 2-56 2_D:56_D DGQNCKEPGNCWENKPGYPEKIAGSKYDPKHDPVELNKQEESIKAMDARNAKRIA # STRALCP results (SPANS in common) for: d1h4ib_ d1h4ib_ 2-56 2_B:56_B DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE # STRALCP results (SPANS in common) for: d1h4id_ d1h4id_ 2-56 2_D:56_D DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE # STRALCP results (SPANS in common) for: d1h4jb_ d1h4jb_ 2-56 2_B:56_B DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE # STRALCP results (SPANS in common) for: d1h4jd_ d1h4jd_ 2-56 2_D:56_D DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE # STRALCP results (SPANS in common) for: d1h4jf_ d1h4jf_ 2-56 2_F:56_F DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE # STRALCP results (SPANS in common) for: d1h4jh_ d1h4jh_ 2-56 2_H:56_H DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE # STRALCP results (SPANS in common) for: d1lrwb_ d1lrwb_ 2-56 2_B:56_B DGTNCKAPGNCWEPKPDYPAKVEGSKYDPQHDPAELSKQGESLAVMDARNEWRVW # STRALCP results (SPANS in common) for: d1lrwd_ d1lrwd_ 2-56 2_D:56_D DGTNCKAPGNCWEPKPDYPAKVEGSKYDPQHDPAELSKQGESLAVMDARNEWRVW # STRALCP results (SPANS in common) for: d1w6sb_ d1w6sb_ 2-56 1002_B:1056_B DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE # STRALCP results (SPANS in common) for: d1w6sd_ d1w6sd_ 2-56 3002_D:3056_D DGTKCKAAGNCWEPKPGFPEKIAGSKYDPKHDPKELNKQADSIKQMEERNKKRVE # STRALCP results (SPANS in common) for: d4aahb_ d4aahb_ 2-56 2_B:56_B DGQNCKEPGNCWENKPGYPEKIAGSKYDPKHDPVELNKQEESIKAMDARNAKRIA END_of_CLUSTER ........... CLUSTER_NB: 4 Nb_of_members(1): 5 Reference_name: d1sc5b_ Length: 72 Nb_of_matches: 53 Nb_of_spans: 4 Nb_of_slots: 8 Cluster Name Class ...##########......############.......###################.############ Cluster:4 d1sc5b_ a.137.11.1 ...LSRLIGLLLE......VTLSKIAQELSK.......LEKKVKELKEKIEKGEYEV.DEKVVKGLIEFF Cluster:4 d1rp3b_ a.137.11.1 ...LSRLIGLLLE......VTLSKIAQELSK.......LEKKVKELKEKIEKGEYEV.DEKVVKGLIEFF Cluster:4 d1rp3d_ a.137.11.1 ...LSRLIGLLLE......VTLSKIAQELSK.......LEKKVKELKEKIEKGEYEV.DEKVVKGLIEFF Cluster:4 d1rp3f_ a.137.11.1 ...LSRLIGLLLE......VTLSKIAQELSK.......LEKKVKELKEKIEKGEYEV.DEKVVKGLIEFF Cluster:4 d1rp3h_ a.137.11.1 ...LSRLIGLLLE......VTLSKIAQELSK.......LEKKVKELKEKIEKGEYEV.DEKVVKGLIEFF # STRALCP results (SPANS in common) for: d1sc5b_ d1sc5b_ 5-14 7_B:16_B LSRLIGLLLE d1sc5b_ 21-32 37_B:48_B VTLSKIAQELSK d1sc5b_ 40-58 56_B:74_B LEKKVKELKEKIEKGEYEV d1sc5b_ 60-71 76_B:87_B DEKVVKGLIEFF # STRALCP results (SPANS in common) for: d1rp3b_ d1rp3b_ 6-15 7_B:16_B LSRLIGLLLE d1rp3b_ 26-37 37_B:48_B VTLSKIAQELSK d1rp3b_ 45-63 56_B:74_B LEKKVKELKEKIEKGEYEV d1rp3b_ 65-76 76_B:87_B DEKVVKGLIEFF # STRALCP results (SPANS in common) for: d1rp3d_ d1rp3d_ 5-14 7_D:16_D LSRLIGLLLE d1rp3d_ 19-30 37_D:48_D VTLSKIAQELSK d1rp3d_ 38-56 56_D:74_D LEKKVKELKEKIEKGEYEV d1rp3d_ 58-69 76_D:87_D DEKVVKGLIEFF # STRALCP results (SPANS in common) for: d1rp3f_ d1rp3f_ 4-13 7_F:16_F LSRLIGLLLE d1rp3f_ 17-28 37_F:48_F VTLSKIAQELSK d1rp3f_ 32-50 56_F:74_F LEKKVKELKEKIEKGEYEV d1rp3f_ 52-63 76_F:87_F DEKVVKGLIEFF # STRALCP results (SPANS in common) for: d1rp3h_ d1rp3h_ 7-16 7_H:16_H LSRLIGLLLE d1rp3h_ 24-35 37_H:48_H VTLSKIAQELSK d1rp3h_ 38-56 56_H:74_H LEKKVKELKEKIEKGEYEV d1rp3h_ 58-69 76_H:87_H DEKVVKGLIEFF END_of_CLUSTER ......... CLUSTER_NB: 5 Nb_of_members(1): 4 Reference_name: d1jmxg_ Length: 76 Nb_of_matches: 70 Nb_of_spans: 1 Nb_of_slots: 8 Cluster Name Class ######################################################################.... Cluster:5 d1jmxg_ a.137.9.1 VAGCTATTDPGWEVDAFGGVSSLCQPMEADLYGCSDPCWPAQVPDMMSTYQDWNAQASNSAEDWRNLGTV.... Cluster:5 d1jjuc_ a.137.9.1 LVGCTTSFDPGWEVDAFGAVSNLCQPMEADLYGCADPCWPAQVADTLNTYPNWSAGADDVMQDWRKLQSV.... Cluster:5 d1jmzg_ a.137.9.1 VAGCTATTDPGWEVDAFGGVSSLCQPMEADLYGCSDPCWPAQVPDMMSTYQDWNAQASNSAEDWRNLGTV.... Cluster:5 d1pbyc_ a.137.9.1 LVGCTTSFDPGWEVDAFGAVSNLCQPMEADLYGCADPCWPAQVADTLNTYPNWSAGADDVMQDWRKLQSV.... # STRALCP results (SPANS in common) for: d1jmxg_ d1jmxg_ 2-71 4_G:74_G VAGCTATTDPGWEVDAFGGVSSLCQPMEADLYGCSDPCWPAQVPDMMSTYQDWNAQASNSAEDWRNLGTV # STRALCP results (SPANS in common) for: d1jjuc_ d1jjuc_ 4-73 4_C:74_C LVGCTTSFDPGWEVDAFGAVSNLCQPMEADLYGCADPCWPAQVADTLNTYPNWSAGADDVMQDWRKLQSV # STRALCP results (SPANS in common) for: d1jmzg_ d1jmzg_ 2-71 4_G:74_G VAGCTATTDPGWEVDAFGGVSSLCQPMEADLYGCSDPCWPAQVPDMMSTYQDWNAQASNSAEDWRNLGTV # STRALCP results (SPANS in common) for: d1pbyc_ d1pbyc_ 4-73 4_C:74_C LVGCTTSFDPGWEVDAFGAVSNLCQPMEADLYGCADPCWPAQVADTLNTYPNWSAGADDVMQDWRKLQSV END_of_CLUSTER ....... CLUSTER_NB: 6 Nb_of_members(1): 3 Reference_name: d1dp5b_ Length: 31 Nb_of_matches: 27 Nb_of_spans: 1 Nb_of_slots: 4 Cluster Name Class .###########################. Cluster:6 d1dp5b_ a.137.7.1 .DQQKVSEIFQSSKEKLQGDAKVVSDAF. Cluster:6 d1dpjb_ a.137.7.1 .DQQKVSEIFQSSKEKLQGDAKVVSDAF. Cluster:6 d1g0vb_ a.137.7.1 .DQQKVSEIFQSSKEKLQGDAMVVSDAF. # STRALCP results (SPANS in common) for: d1dp5b_ d1dp5b_ 3-29 4_B:30_B DQQKVSEIFQSSKEKLQGDAKVVSDAF # STRALCP results (SPANS in common) for: d1dpjb_ d1dpjb_ 2-28 4_B:30_B DQQKVSEIFQSSKEKLQGDAKVVSDAF # STRALCP results (SPANS in common) for: d1g0vb_ d1g0vb_ 2-28 4_B:30_B DQQKVSEIFQSSKEKLQGDAMVVSDAF END_of_CLUSTER ...... CLUSTER_NB: 7 Nb_of_members(1): 2 Reference_name: d1ef1d_ Length: 90 Nb_of_matches: 88 Nb_of_spans: 1 Nb_of_slots: 10 Cluster Name Class ######################################################################################## Cluster:7 d1ef1d_ a.137.5.1 EASADLRADAMAKDRSEEERTTEAEKNERVQKHLKALTSELANARDESKKTANDXIHAENXRLGRDKYKTLRQIRQGNTKQRIDEFES Cluster:7 d1ef1c_ a.137.5.1 EASADLRADAMAKDRSEEERTTEAEKNERVQKHLKALTSELANARDESKKTANDXIHAENXRLGRDKYKTLRQIRQGNTKQRIDEFES # STRALCP results (SPANS in common) for: d1ef1d_ d1ef1d_ 2-89 489_D:576_D EASADLRADAMAKDRSEEERTTEAEKNERVQKHLKALTSELANARDESKKTANDXIHAENXRLGRDKYKTLRQIRQGNTKQRIDEFES # STRALCP results (SPANS in common) for: d1ef1c_ d1ef1c_ 2-89 489_C:576_C EASADLRADAMAKDRSEEERTTEAEKNERVQKHLKALTSELANARDESKKTANDXIHAENXRLGRDKYKTLRQIRQGNTKQRIDEFES END_of_CLUSTER .... CLUSTER_NB: 8 Nb_of_members(1): 2 Reference_name: d1e79i_ Length: 47 Nb_of_matches: 34 Nb_of_spans: 2 Nb_of_slots: 5 Cluster Name Class ########################...........########## Cluster:8 d1e79i_ a.137.8.1 AYWRQAGLSYIRYSQICAKAVRDA...........TSGSTIKIVK Cluster:8 d1h8ei_ a.137.8.1 AYWRQAGLSYIRYSQICAKAVRDA...........TSGSTIKIVK # STRALCP results (SPANS in common) for: d1e79i_ d1e79i_ 2-25 2_I:25_I AYWRQAGLSYIRYSQICAKAVRDA d1e79i_ 37-46 37_I:46_I TSGSTIKIVK # STRALCP results (SPANS in common) for: d1h8ei_ d1h8ei_ 2-25 2_I:25_I AYWRQAGLSYIRYSQICAKAVRDA d1h8ei_ 26-35 37_I:46_I TSGSTIKIVK END_of_CLUSTER ... CLUSTER_NB: 9 Nb_of_members(1): 2 Reference_name: d1hfet_ Length: 88 Nb_of_matches: 86 Nb_of_spans: 1 Nb_of_slots: 9 Cluster Name Class ###################################################################################### Cluster:9 d1hfet_ a.137.4.1 KQIKDYMLDRINGVYGADAKFPVRASQDNTQVKALYKSYLEKPLGHKSHDLLHTHWFDKSKGVKELTTAGKLPNPRASEFEGPYPY Cluster:9 d1hfes_ a.137.4.1 KQIKDYMLDRINGVYGADAKFPVRASQDNTQVKALYKSYLEKPLGHKSHDLLHTHWFDKSKGVKELTTAGKLPNPRASEFEGPYPY # STRALCP results (SPANS in common) for: d1hfet_ d1hfet_ 2-87 37_T:122_T KQIKDYMLDRINGVYGADAKFPVRASQDNTQVKALYKSYLEKPLGHKSHDLLHTHWFDKSKGVKELTTAGKLPNPRASEFEGPYPY # STRALCP results (SPANS in common) for: d1hfes_ d1hfes_ 2-87 37_S:122_S KQIKDYMLDRINGVYGADAKFPVRASQDNTQVKALYKSYLEKPLGHKSHDLLHTHWFDKSKGVKELTTAGKLPNPRASEFEGPYPY END_of_CLUSTER . CLUSTER_NB: 10 Nb_of_members(1): 2 Reference_name: d1sa1e_ Length: 134 Nb_of_matches: 111 Nb_of_spans: 3 Nb_of_slots: 14 Cluster Name Class ####################..................######################.#####################################################################.. Cluster:10 d1sa1e_ a.137.10.1 EVIELNKCTSGQSFEVILKP..................LEEIQKKLEAAEERRKYQEAEL.KHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKE.. Cluster:10 d1sa0e_ a.137.10.1 EVIELNKCTSGQSFEVILKP..................LEEIQKKLEAAEERRKYQEAEL.KHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKE.. # STRALCP results (SPANS in common) for: d1sa1e_ d1sa1e_ 2-21 7_E:26_E EVIELNKCTSGQSFEVILKP d1sa1e_ 40-61 47_E:68_E LEEIQKKLEAAEERRKYQEAEL d1sa1e_ 63-131 70_E:138_E KHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKE # STRALCP results (SPANS in common) for: d1sa0e_ d1sa0e_ 4-23 7_E:26_E EVIELNKCTSGQSFEVILKP d1sa0e_ 30-51 47_E:68_E LEEIQKKLEAAEERRKYQEAEL d1sa0e_ 53-121 70_E:138_E KHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKE END_of_CLUSTER Calculated number of clusters: 10 END of job